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Key ReferencesSampling effort to minimize false absences for juvenile Cutthroat Trout or Bull Trout in cold-water habitats. Appendix 2 from Isaak, D., M. Young, D. Nagel, D. Horan, and M. Groce. 2015. The cold-water climate shield: Delineating refugia for preserving native trout through the 21st Century. Global Change Biology 21 doi:10.1111/gcb.12879. Carim, K. J., T. Wilcox, M.K. Young, K.S. McKelvey, and M.K. Schwartz. (2014) Protocol for collecting eDNA samples from streams. U.S.D.A. Forest Service, Rocky Mountain Research Station V2.1 (April 2015). Eby, Lisa A.; Helmy, Olga; Holsinger, Lisa M.; Young, Michael K. 2014. Evidence of climate-induced range contractions in bull trout Salvelinus confluentus in a Rocky Mountain watershed, U.S.A. PLoS ONE. 9(6): e98812. Isaak, Dan; Rieman, Bruce; Horan, Dona 2009. A watershed-scale monitoring protocol for bull trout. Gen. Tech. Rep. RMRS-GTR-224. Fort Collins, CO: U.S. Department of Agriculture, Forest Service, Rocky Mountain Research Station. 25 p. McKelvey, K. S.; Young, M. K.; Knotek, W. L.; Carim, K. J.; Wilcox, T. M.; Padgett-Stewart, T. M.; Schwartz, M. K. 2016. Sampling large geographic areas for rare species using environmental DNA: A study of bull trout Salvelinus confluentus occupancy in western Montana. Journal of Fish Biology. doi: 10.1111/jfb.12863. Peterson, James T.; Dunham, Jason 2003. Combining inferences from models of capture efficiency, detectability, and suitable habitat to classify landscapes for conservation of threatened bull trout. Conservation biology. 17(4): 1070-1077. Wilcox TM, Carim KJ, McKelvey KS, Young MK, Schwartz MK. 2015. The Dual Challenges of Generality and Specificity When Developing Environmental DNA Markers for Species and Subspecies of Oncorhynchus. PLoS ONE 10(11): e0142008. doi:10.1371/journal.pone.0142008. Wilcox, Taylor M., McKelvey, Kevin S., Young, Michael K., Sepulveda, Adam J., Shepard, Bradley B., Jane, Stephen F., Whiteley, Andrew R., Lowe, Winsor H., Schwartz, Michael K. 2016. Understanding environmental DNA detection probabilities: A case study using a stream-dwelling char Salvelinus fontinalis. Biological Conservation. 194. 209–216. Wilcox, Taylor M.; McKelvey, Kevin S.; Young, Michael K.; Jane, Stephen F.; Lowe, Winsor H.; Whiteley, Andrew R.; Schwartz, Michael K. 2013. Robust detection of rare species using environmental DNA: The importance of primer specificity. PLoS ONE 8(3): e59520. doi: 10.1371/journal.pone.0059520 Wilcox, Taylor M.; Schwartz, Michael K.; McKelvey, Kevin S.; Young, Michael K.; Lowe, Winsor H. 2014. A blocking primer increases specificity in environmental DNA detection of bull trout (Salvelinus confluentus). Conservation Genetics Resources. 6: 283-284. Related WebsitesNorWeST: Regional Database & Modeled Stream Temperature SSN & STARS: Tools for Spatial Statistical Modeling on Stream Networks Stream Temperature Modeling and Monitoring U.S. Stream Flow Metric Dataset National Genomics Center for Wildlife and Fish Conservation Sculpins of the West - A molecular taxonomy of Cottus in western North America The Range-Wide Bull Trout eDNA Project
https://www.fs.usda.gov/rm/boise/AWAE/projects/ClimateShield/monitoring.html |